BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H11SP1|AL428635
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1725 1496 0.0
>3x_Contig1725
Length = 17473
Score = 1496 bits (743), Expect = 0.0
Identities = 779/801 (97%), Gaps = 1/801 (0%)
Strand = Plus / Minus
Query: 1 gatctttcctttggtgacgtagactttcttgaacatgctcagcacgtaacttcaaagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1844 gatctttcctttggtgacgtagactttcttgaacatgctcagcacgtaacttcaaagagc 1785
Query: 61 ttagtcttgccaggaatgaatagtactcctgtacctgtataaaacagtgagaattgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 ttagtcttgccaggaatgaatagtactcctgtacctgtataaaacagtgagaattgtttg 1725
Query: 121 gatcaaactcacacatctttcgctggatggacagctcaagttgcataacggcttcattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 gatcaaactcacacatctttcgctggatggacagctcaagttgcataacggcttcattac 1665
Query: 181 accggataactagcctctcggctacgtacctcatatcttccattcctttcgagtaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 accggataactagcctctcggctacgtacctcatatcttccattcctttcgagtaacaac 1605
Query: 241 actcttctaactcttaattcagtttcaccccccctctcactagatctcttacttacaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 actcttctaactcttaattcagtttcaccccccctctcactagatctcttacttacaaga 1545
Query: 301 tggtgtgttgtgctgtatctatgctgaacagacagataaactgtgtatgggtatggctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 tggtgtgttgtgctgtatctatgctgaacagacagataaactgtgtatgggtatggctat 1485
Query: 361 ttagtcaaaaggaaaaaraacagtccaaaagagacaagaaaaaaataataaaaratacac 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1484 ttagtcaaaaggaaaaaaaacagtccaaaagagacaagaaaaaaataataaaaaatacac 1425
Query: 421 ttctaatgattatgtactcagagctgttaagagaatgagaacatgcttatrccagtctga 480
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1424 ttctaatgattatttactcagagctgttaagagaatgagaacatgcttataccagtctga 1365
Query: 481 gattkrarttgasacaraaacggagagatcttcaagtcagtagaatatgtccattatbtc 540
||| | |||| ||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1364 aatttaaattgaaacaaaaacggagagatcttcaagtcagtagaatatgtccattatttc 1305
Query: 541 gctctttgtcttgttacyagttcctcatttctkcttaccttctvaccatcttgaacatca 600
||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1304 gctctttgtcttgttactagttcctcatttcttcttaccttctaaccatcttgaacatca 1245
Query: 601 ratctsatctggcatggtgtattgttttctgatttcatatttwwwwtgtctcgagaacaa 660
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1244 aatctaatctggcatggtgtattgttttctgatttcatattttttttgtctcgagaacaa 1185
Query: 661 tgagatgagctgccgacaaatttggaaaaatgtttcgtggtttgcctattttggaggtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 tgagatgagctgccgacaaatttggaaaaatgtttcgtggtttgcctattttggaggtct 1125
Query: 721 ggggttttgggctctcaagatctcattttttgggga-cacagaagacatctctaccaaca 779
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1124 ggggttttgggctctcaagatctcattttttggggaccacagaagacatctctaccaaca 1065
Query: 780 garaaaaacttaaataagata 800
|| ||||||||||||||||||
Sbjct: 1064 gagaaaaacttaaataagata 1044
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5408
Number of Sequences: 1807
Number of extensions: 5408
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)